Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
O00370 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.88■□□□□ 0.29
O00370 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.88■□□□□ 0.29
O00370 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.87■□□□□ 0.29
O00370 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
O00370 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.87■□□□□ 0.29
O00370 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
O00370 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.87■□□□□ 0.29
O00370 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.87■□□□□ 0.29
O00370 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.87■□□□□ 0.29
O00370 AC241585.1-201ENST00000433527 519 ntBASIC16.87■□□□□ 0.29
O00370 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.87■□□□□ 0.29
O00370 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.87■□□□□ 0.29
O00370 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.87■□□□□ 0.29
O00370 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.87■□□□□ 0.29
O00370 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.87■□□□□ 0.29
O00370 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.87■□□□□ 0.29
O00370 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
O00370 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.87■□□□□ 0.29
O00370 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.87■□□□□ 0.29
O00370 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
O00370 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
O00370 FAM45BP-202ENST00000592932 1624 ntBASIC16.87■□□□□ 0.29
O00370 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
O00370 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
O00370 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
O00370 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
O00370 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
O00370 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.87■□□□□ 0.29
O00370 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.87■□□□□ 0.29
O00370 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
O00370 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
O00370 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
O00370 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
O00370 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
O00370 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
O00370 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
O00370 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.86■□□□□ 0.29
O00370 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.86■□□□□ 0.29
O00370 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.86■□□□□ 0.29
O00370 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
O00370 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.86■□□□□ 0.29
O00370 RN7SL618P-201ENST00000477850 296 ntBASIC16.86■□□□□ 0.29
O00370 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.86■□□□□ 0.29
O00370 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.86■□□□□ 0.29
O00370 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
O00370 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.86■□□□□ 0.29
O00370 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
O00370 AC025048.3-201ENST00000590609 569 ntBASIC16.86■□□□□ 0.29
O00370 AC005702.4-201ENST00000618393 416 ntBASIC16.86■□□□□ 0.29
O00370 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.86■□□□□ 0.29
O00370 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
O00370 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
O00370 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.86■□□□□ 0.29
O00370 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms