Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM1O00151 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDLIM1O00151 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM1O00151 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.17■□□□□ 0.02
PDLIM1O00151 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 CICP8-201ENST00000455800 2813 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM1O00151 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM1O00151 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM1O00151 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM1O00151 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 AC120114.3-201ENST00000611923 658 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 MIR1199-201ENST00000621445 119 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.16■□□□□ 0.02
PDLIM1O00151 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 AC105250.1-201ENST00000509378 2057 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDLIM1O00151 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 AC092127.1-201ENST00000567093 3455 ntBASIC15.16■□□□□ 0.02
PDLIM1O00151 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDLIM1O00151 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDLIM1O00151 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDLIM1O00151 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
PDLIM1O00151 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 AC112693.3-201ENST00000624819 1983 ntBASIC15.15■□□□□ 0.02
PDLIM1O00151 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 SLC25A1P1-201ENST00000528351 927 ntBASIC15.15■□□□□ 0.02
PDLIM1O00151 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.15■□□□□ 0.02
PDLIM1O00151 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.15■□□□□ 0.02
PDLIM1O00151 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms