Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AC002347.1-201ENST00000569543 541 ntBASIC13.57□□□□□ -0.24
TMEM235A6NFC5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 CICP4-201ENST00000447359 2812 ntBASIC13.57□□□□□ -0.24
TMEM235A6NFC5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 FGD5P1-202ENST00000614866 2498 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 AC026396.1-201ENST00000419388 421 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 GPX1P2-201ENST00000429271 606 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 HCG4P8-203ENST00000443049 980 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MIR4751-201ENST00000578027 74 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 LINC01711-201ENST00000598340 967 ntBASIC13.56□□□□□ -0.24
TMEM235A6NFC5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TMEM235A6NFC5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TMEM235A6NFC5 AC148477.4-201ENST00000613430 1793 ntBASIC13.55□□□□□ -0.24
TMEM235A6NFC5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms