Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC018892.3-201ENST00000623986 2499 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 RNU1-129P-201ENST00000384064 167 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 DUSP5P1-201ENST00000441325 1139 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC093724.1-201ENST00000448659 1027 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC087388.1-201ENST00000571370 1112 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 U1.21-201ENST00000580816 167 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC006557.2-201ENST00000592985 1240 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC025062.2-201ENST00000605477 670 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 LINC01230-201ENST00000625222 3017 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 INTS4P1-203ENST00000641008 3683 ntBASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MEIS3P1A6NDR6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AL390755.1-201ENST00000623716 2027 ntBASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AL049597.2-201ENST00000565575 961 ntBASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 FGD5P1-202ENST00000614866 2498 ntBASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MEIS3P1A6NDR6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MEIS3P1A6NDR6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms