Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MTND6P24-201ENST00000440466 518 ntBASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 COX20P2-201ENST00000452636 358 ntBASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TERF1P3-201ENST00000505638 1227 ntBASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC007967.4-201ENST00000614700 386 ntBASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC013268.4-201ENST00000637413 2228 ntBASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 AC236430.1-201ENST00000402231 743 ntBASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRBV4S1A1TA0A5B7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms