Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 CDC14C-201ENST00000428251 1719 ntBASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 KRT18P13-201ENST00000400056 1290 ntBASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 KRT18P32-201ENST00000424695 1287 ntBASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 AC008677.1-201ENST00000519230 1561 ntBASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HLA-DRB4X5D2U9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC004461.1-201ENST00000412461 403 ntBASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AL627223.1-201ENST00000416693 442 ntBASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 AC023157.3-201ENST00000619086 2088 ntBASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms