Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 SPDYE14P-201ENST00000442619 822 ntBASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 UGT1A2P-201ENST00000454886 866 ntBASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 RN7SL589P-201ENST00000481268 310 ntBASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 AC093214.1-201ENST00000511688 1107 ntBASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 GPAA1P2-202ENST00000606848 1787 ntBASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX49Q9Y6V7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AC026150.2-201ENST00000564693 1156 ntBASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AC051619.7-201ENST00000568314 623 ntBASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AL031055.1-201ENST00000606362 631 ntBASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
DDX49Q9Y6V7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 AKAP8P1-201ENST00000434743 1349 ntBASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.08■□□□□ 0.65
DDX49Q9Y6V7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 MIR661-201ENST00000384842 89 ntBASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.08■□□□□ 0.64
DDX49Q9Y6V7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms