Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 HAUS4P1-201ENST00000406739 1145 ntBASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AL590326.2-201ENST00000625139 305 ntBASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 AC023024.2-201ENST00000623561 1993 ntBASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TRAPPC1Q9Y5R8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC011477.6-201ENST00000604980 1927 ntBASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM8A3P-201ENST00000427218 844 ntBASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 NCF1B-203ENST00000435988 1254 ntBASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC010653.2-201ENST00000623505 997 ntBASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAPPC1Q9Y5R8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
TRAPPC1Q9Y5R8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms