Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AC133552.6-201ENST00000613406 534 ntBASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 MIR8072-201ENST00000614241 80 ntBASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 COX11-210ENST00000639671 696 ntBASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 C8orf49-201ENST00000525043 1968 ntBASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGA9Q9Y5G4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 GGT4P-201ENST00000623672 1708 ntBASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA9Q9Y5G4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms