Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 AC092127.1-201ENST00000567093 3455 ntBASIC11.04□□□□□ -0.64
CSDC2Q9Y534 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CSDC2Q9Y534 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AL359258.3-201ENST00000622910 2331 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AL691432.1-201ENST00000596308 1422 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AC004987.2-201ENST00000395959 1148 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 HNRNPDP1-201ENST00000439535 754 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AC098859.1-201ENST00000502915 1238 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AC023141.13-201ENST00000604991 943 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 IFNL4P1-201ENST00000607083 540 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AC013726.1-201ENST00000563747 2285 ntBASIC11.03□□□□□ -0.64
CSDC2Q9Y534 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSDC2Q9Y534 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSDC2Q9Y534 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.02□□□□□ -0.65
CSDC2Q9Y534 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms