Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHA4Q9UN74 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 AL589987.1-201ENST00000453380 819 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 TIMM17BP1-201ENST00000545713 516 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 AC011467.4-201ENST00000594891 528 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHA4Q9UN74 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHA4Q9UN74 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 SSR4P1-203ENST00000599569 2260 ntBASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDHA4Q9UN74 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 AC136621.1-201ENST00000624017 2304 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 HMGN1P19-201ENST00000436976 333 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 MEIS3P1-201ENST00000495167 958 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms