Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 AL512324.3-201ENST00000619383 882 ntBASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RIMBP3Q9UFD9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 TSPY25P-201ENST00000429463 745 ntBASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 NME6-208ENST00000435684 599 ntTSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AL590235.1-201ENST00000564650 861 ntBASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AC007326.1-201ENST00000604539 458 ntBASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AC022188.1-201ENST00000620960 1664 ntBASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AC055811.4-201ENST00000624039 1754 ntBASIC24.22■■□□□ 1.47
RIMBP3Q9UFD9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 RPSAP15-201ENST00000448168 861 ntBASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 PCDHB18P-201ENST00000524813 2368 ntBASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 CCL25-202ENST00000315626 450 ntTSL 2 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 NHP2P1-201ENST00000335274 462 ntBASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 KRT18P46-201ENST00000435568 1279 ntBASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 AC009560.1-201ENST00000620208 434 ntBASIC24.21■■□□□ 1.47
RIMBP3Q9UFD9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RIMBP3Q9UFD9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.47
RIMBP3Q9UFD9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 HLA-DMA-203ENST00000395305 777 ntBASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 AC012441.2-201ENST00000444843 739 ntBASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 AC022616.1-201ENST00000518688 554 ntBASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 NAV1-210ENST00000593583 726 ntBASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RIMBP3Q9UFD9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 AP000974.1-201ENST00000623909 2387 ntBASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
RIMBP3Q9UFD9 AF274858.1-201ENST00000406288 372 ntBASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms