Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.42■□□□□ 0.22
DNMT3BQ9UBC3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 FAM21FP-201ENST00000426241 1131 ntBASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AC026410.3-201ENST00000514280 936 ntBASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 DRD5P1-201ENST00000456605 1438 ntBASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNMT3BQ9UBC3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AC092850.2-201ENST00000623821 2697 ntBASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 BRWD1P1-201ENST00000401091 371 ntBASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AL606495.2-201ENST00000605867 535 ntBASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AC006449.5-201ENST00000610658 2098 ntBASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms