Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HMG20BQ9P0W2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AP006294.1-201ENST00000415407 339 ntBASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 INE1-201ENST00000456273 945 ntBASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 TMEM261P1-201ENST00000604899 340 ntBASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 IGHV3-72-202ENST00000621503 303 ntBASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20BQ9P0W2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 WFDC1-204ENST00000613603 549 ntBASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.18■□□□□ 0.66
HMG20BQ9P0W2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms