Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 AL355334.1-201ENST00000417713 215 ntBASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 EEF1DP6-201ENST00000449232 372 ntBASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.76■□□□□ 0.27
CXXC1Q9P0U4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 Z97180.1-201ENST00000445173 988 ntBASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 AC114812.1-204ENST00000449669 728 ntBASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 AC018635.2-201ENST00000608625 364 ntBASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CXXC1Q9P0U4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 AC069218.1-201ENST00000435269 762 ntBASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.74■□□□□ 0.27
CXXC1Q9P0U4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms