Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AC009090.5-201ENST00000624886 2285 ntBASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM248Q9NWD8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 RRP7BP-205ENST00000566851 833 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AL132655.2-201ENST00000596276 594 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AC099568.2-201ENST00000609194 695 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 SLC7A15P-201ENST00000424028 1363 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AL391825.1-201ENST00000457671 1364 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 AC090616.6-203ENST00000579186 1945 ntBASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM248Q9NWD8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM248Q9NWD8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 PIN1P1-201ENST00000412108 996 ntBASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 MIR3197-201ENST00000582241 73 ntBASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AC007541.1-201ENST00000570282 1469 ntBASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM248Q9NWD8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM248Q9NWD8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms