Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC002056.1-201ENST00000395613 760 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC026396.1-201ENST00000419388 421 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 FAAHP1-202ENST00000446499 1238 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC105233.2-201ENST00000523697 349 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AF228730.5-201ENST00000530288 346 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 KRT19P2-202ENST00000557173 1012 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC106881.1-201ENST00000605849 3329 ntBASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE2Q9NRR3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CICP23-201ENST00000605013 2741 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AC007292.2-201ENST00000593524 1812 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms