Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AC092580.3-201ENST00000430932 139 ntBASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AC093214.1-201ENST00000511688 1107 ntBASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AL390754.1-201ENST00000619088 582 ntBASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SDHAF3Q9NRP4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 MIR770-201ENST00000390219 98 ntBASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SDHAF3Q9NRP4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms