Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 IGHV3-42-201ENST00000520410 361 ntBASIC13.59□□□□□ -0.23
GCM1Q9NP62 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 OR2I1P-210ENST00000642037 4691 ntBASIC13.59□□□□□ -0.23
GCM1Q9NP62 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.59□□□□□ -0.23
GCM1Q9NP62 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GCM1Q9NP62 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.58□□□□□ -0.23
GCM1Q9NP62 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GCM1Q9NP62 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 MIR770-201ENST00000390219 98 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 AC005498.2-205ENST00000593218 784 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 AL390955.2-201ENST00000603032 514 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 AL355385.1-201ENST00000606123 409 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 PCDHA1-201ENST00000378133 2726 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 AC134407.2-201ENST00000625089 1978 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GCM1Q9NP62 KRT8P12-202ENST00000472924 1397 ntBASIC13.58□□□□□ -0.24
GCM1Q9NP62 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GCM1Q9NP62 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 AL080243.2-201ENST00000418783 582 ntBASIC13.57□□□□□ -0.24
GCM1Q9NP62 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.57□□□□□ -0.24
GCM1Q9NP62 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GCM1Q9NP62 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms