Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PRAL-201ENST00000624952 3286 ntBASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.96□□□□□ -0.17
KIAA1549Q9HCM3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 PDIA3P1-201ENST00000471856 1510 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC104457.1-201ENST00000401024 814 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC234783.1-201ENST00000441761 496 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC106886.1-201ENST00000568660 600 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC244669.2-201ENST00000612320 853 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AL033527.4-201ENST00000641026 673 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 AC136621.1-201ENST00000624017 2304 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 KRT8P22-201ENST00000562317 1415 ntBASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KIAA1549Q9HCM3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 AC127383.1-201ENST00000444697 1800 ntBASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 RPS2P32-201ENST00000439199 892 ntBASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 MIR6775-201ENST00000617557 69 ntBASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.95□□□□□ -0.18
KIAA1549Q9HCM3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MIR658-201ENST00000385210 100 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AC138932.1-201ENST00000534164 6830 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms