Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX6-2Q9C056 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
NKX6-2Q9C056 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 CICP11-201ENST00000434745 2827 ntBASIC12.89□□□□□ -0.35
NKX6-2Q9C056 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 AL023973.1-201ENST00000624619 620 ntBASIC12.89□□□□□ -0.35
NKX6-2Q9C056 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NKX6-2Q9C056 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AC105206.1-202ENST00000314927 2368 ntBASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AP002414.1-201ENST00000391405 1147 ntBASIC12.88□□□□□ -0.35
NKX6-2Q9C056 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 COX11P1-201ENST00000489116 835 ntBASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AC009533.2-201ENST00000543664 586 ntBASIC12.88□□□□□ -0.35
NKX6-2Q9C056 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 AL353801.3-201ENST00000609898 542 ntBASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms