Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 TMEM14DP-201ENST00000422205 345 ntBASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 KRT17P8-201ENST00000540749 863 ntBASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPAP1Q9BWH6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 RAB43P1-201ENST00000561790 589 ntBASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 TMEM261P1-201ENST00000604899 340 ntBASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.13■□□□□ 0.65
RPAP1Q9BWH6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 WFDC1-204ENST00000613603 549 ntBASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPAP1Q9BWH6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 Z97205.2-201ENST00000564697 1639 ntBASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 AC007389.4-201ENST00000454674 793 ntBASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms