Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 KRT223P-202ENST00000449164 1292 ntBASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AC233724.13-201ENST00000598383 410 ntBASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC85AQ96PX6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 AC120045.2-201ENST00000567334 178 ntBASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 AC133552.6-201ENST00000613406 534 ntBASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 PDIA3P1-201ENST00000471856 1510 ntBASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC85AQ96PX6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 AC006449.5-201ENST00000610658 2098 ntBASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 AC104989.1-201ENST00000519711 778 ntBASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 MIR4313-201ENST00000580760 101 ntBASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 CLUHP6-201ENST00000580789 941 ntBASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 AL139384.1-201ENST00000612143 3047 ntBASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC85AQ96PX6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms