Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 RPL13P2-201ENST00000440687 659 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AL589987.1-201ENST00000453380 819 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AC092337.1-201ENST00000568699 1129 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 MIR4313-201ENST00000580760 101 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AF228730.6-201ENST00000641497 218 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 AC084121.3-201ENST00000641716 218 ntBASIC16.3■□□□□ 0.2
RPRD1AQ96P16 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPRD1AQ96P16 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 SLED1-202ENST00000512051 380 ntBASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TPRX2P-201ENST00000535362 881 ntBASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AL132655.2-201ENST00000596276 594 ntBASIC16.29■□□□□ 0.2
RPRD1AQ96P16 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AL365203.3-201ENST00000609742 2057 ntBASIC16.29■□□□□ 0.2
RPRD1AQ96P16 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPRD1AQ96P16 AC007541.1-201ENST00000570282 1469 ntBASIC16.29■□□□□ 0.2
RPRD1AQ96P16 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PIN1P1-201ENST00000412108 996 ntBASIC16.28■□□□□ 0.2
RPRD1AQ96P16 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms