Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 AP001160.2-201ENST00000596071 487 ntBASIC15.23■□□□□ 0.03
UBE2E3Q969T4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 AC097359.3-201ENST00000603982 1210 ntBASIC15.23■□□□□ 0.03
UBE2E3Q969T4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBE2E3Q969T4 CICP6-201ENST00000457191 2729 ntBASIC15.23■□□□□ 0.03
UBE2E3Q969T4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AC105250.1-201ENST00000509378 2057 ntBASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AL645939.2-201ENST00000427340 991 ntBASIC15.22■□□□□ 0.03
UBE2E3Q969T4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AC109322.1-201ENST00000524499 1264 ntBASIC15.22■□□□□ 0.03
UBE2E3Q969T4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2E3Q969T4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 TUBB3P1-201ENST00000405796 1332 ntBASIC15.21■□□□□ 0.03
UBE2E3Q969T4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.21■□□□□ 0.03
UBE2E3Q969T4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2E3Q969T4 Z92544.3-201ENST00000624747 417 ntBASIC15.21■□□□□ 0.03
UBE2E3Q969T4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms