Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF34Q969K3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF34Q969K3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF34Q969K3 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
RNF34Q969K3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF34Q969K3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF34Q969K3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 AZGP1P1-201ENST00000411909 902 ntBASIC16.59■□□□□ 0.25
RNF34Q969K3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF34Q969K3 PHKG1P2-201ENST00000457537 863 ntBASIC16.59■□□□□ 0.25
RNF34Q969K3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF34Q969K3 AC087499.5-201ENST00000452760 1342 ntBASIC16.59■□□□□ 0.25
RNF34Q969K3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.59■□□□□ 0.25
RNF34Q969K3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RNF34Q969K3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF34Q969K3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF34Q969K3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF34Q969K3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF34Q969K3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF34Q969K3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF34Q969K3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF34Q969K3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF34Q969K3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF34Q969K3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF34Q969K3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RNF34Q969K3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF34Q969K3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF34Q969K3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF34Q969K3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF34Q969K3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RNF34Q969K3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RNF34Q969K3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.58■□□□□ 0.24
RNF34Q969K3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF34Q969K3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
RNF34Q969K3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF34Q969K3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF34Q969K3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF34Q969K3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF34Q969K3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF34Q969K3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms