Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC016027.1-202ENST00000607927 1699 ntBASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC107890.1-201ENST00000422478 521 ntBASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC125807.1-201ENST00000483097 614 ntBASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC093214.1-201ENST00000511688 1107 ntBASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC026150.2-201ENST00000564693 1156 ntBASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 MIR943-201ENST00000401286 94 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 BCRP1-201ENST00000444246 691 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 INGX-202ENST00000489074 768 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 DUX4L27-201ENST00000554796 1261 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 AC051619.7-201ENST00000568314 623 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms