Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 RPL37AP1-201ENST00000412502 279 ntBASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AJ011932.1-201ENST00000621707 465 ntBASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AC023157.3-201ENST00000619086 2088 ntBASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SMARCC2Q8TAQ2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.52■□□□□ 0.55
SMARCC2Q8TAQ2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 AZGP1P1-201ENST00000411909 902 ntBASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 AC136604.1-201ENST00000418535 575 ntBASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 TEX28P1-201ENST00000613479 1221 ntBASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 TEX28P2-201ENST00000617764 1221 ntBASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SMARCC2Q8TAQ2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 SPDYE17-201ENST00000412399 783 ntBASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 HIST3H2BA-201ENST00000436555 524 ntBASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.5■□□□□ 0.55
SMARCC2Q8TAQ2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms