Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 POP1-202ENST00000401707 4719 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 AC124319.4-201ENST00000622931 2161 ntBASIC9.66□□□□□ -0.86
SVIPQ8NHG7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.66□□□□□ -0.86
SVIPQ8NHG7 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SVIPQ8NHG7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 AC018358.1-201ENST00000631079 1402 ntBASIC9.65□□□□□ -0.86
SVIPQ8NHG7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 AC131212.3-201ENST00000624087 4219 ntBASIC9.65□□□□□ -0.86
SVIPQ8NHG7 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 WASH2P-201ENST00000453662 1684 ntBASIC9.65□□□□□ -0.86
SVIPQ8NHG7 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 BTBD18-202ENST00000436147 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC9.65□□□□□ -0.86
SVIPQ8NHG7 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 MATN1-201ENST00000373765 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms