Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 AC007718.1-201ENST00000621078 280 ntBASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 AC002472.3-201ENST00000640124 621 ntBASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 KRT8P21-201ENST00000430398 1491 ntBASIC20.5■□□□□ 0.87
COL22A1Q8NFW1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AC079112.1-201ENST00000454972 939 ntBASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AL157792.1-201ENST00000488281 530 ntBASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AC100827.2-201ENST00000563214 1194 ntBASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 AL157813.1-201ENST00000612996 587 ntBASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL22A1Q8NFW1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AP000356.3-201ENST00000382243 753 ntBASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AC078875.1-201ENST00000431907 724 ntBASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AC026803.1-201ENST00000569130 274 ntBASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 E2F3P2-201ENST00000447755 1422 ntBASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL22A1Q8NFW1 AC139713.2-201ENST00000641328 2723 ntBASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 FAM58BP-201ENST00000439056 645 ntBASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 AC130709.1-201ENST00000484779 1212 ntBASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 MIR6858-201ENST00000620733 67 ntBASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.47■□□□□ 0.87
COL22A1Q8NFW1 AC005052.1-201ENST00000625181 2492 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms