Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.56□□□□□ -0.08
LSMEM1Q8N8F7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AC005252.3-201ENST00000623855 2258 ntBASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AC087481.3-201ENST00000602886 1894 ntBASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AP000344.2-201ENST00000512987 629 ntBASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ALG1L8P-201ENST00000533887 760 ntBASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 MIR4469-201ENST00000583919 79 ntBASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LSMEM1Q8N8F7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC004461.1-201ENST00000412461 403 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AL627223.1-201ENST00000416693 442 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AL353705.2-201ENST00000428243 662 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC005237.2-201ENST00000434368 219 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AP000347.1-202ENST00000435868 847 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms