Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 CR383656.12-201ENST00000549567 513 ntBASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 BANF1P1-201ENST00000553684 263 ntBASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 AC007541.1-201ENST00000570282 1469 ntBASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC33Q8N5R6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 COX5BP8-201ENST00000416911 349 ntBASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 AL008721.1-201ENST00000609964 604 ntBASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms