Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 AP001160.2-201ENST00000596071 487 ntBASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC116Q8IYX3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AZGP1P1-201ENST00000411909 902 ntBASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 EEF1DP4-201ENST00000446006 880 ntBASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AC139530.3-201ENST00000620344 690 ntBASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC116Q8IYX3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 AC073347.1-201ENST00000421633 2643 ntBASIC14.96□□□□□ -0.02
CCDC116Q8IYX3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 AC136621.1-201ENST00000624017 2304 ntBASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 LINC00554-201ENST00000564841 3011 ntBASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms