Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AF186996.4-201ENST00000467186 377 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 RNPS1P1-201ENST00000507437 918 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AC073648.2-201ENST00000510116 352 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 IGHV3-65-201ENST00000523210 341 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 SLC25A6P4-201ENST00000586535 553 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AGAP7P-201ENST00000582299 2062 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AGAP14-201ENST00000624701 2060 ntBASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM42Q8IWZ5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 MRPL20P1-201ENST00000400819 433 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 HMGA1P7-201ENST00000406908 502 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 KRT18P27-201ENST00000427733 1299 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 KRT18P67-201ENST00000432816 1264 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 KRT18P34-201ENST00000488218 1270 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 AC079776.4-201ENST00000511039 504 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 AL645728.2-201ENST00000641974 660 ntBASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM42Q8IWZ5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 AL390755.1-201ENST00000623716 2027 ntBASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 AC021087.4-201ENST00000563761 564 ntBASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 AL031432.2-201ENST00000566714 459 ntBASIC15.87■□□□□ 0.13
TRIM42Q8IWZ5 AL928711.1-201ENST00000570165 459 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms