Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AC008687.7-202ENST00000637404 953 ntBASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AC018892.3-201ENST00000623986 2499 ntBASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 NUS1P3-201ENST00000423502 862 ntBASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 AC097724.1-201ENST00000609581 426 ntBASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 PRAL-201ENST00000624952 3286 ntBASIC15.67■□□□□ 0.1
SDK1Q7Z5N4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SLC25A24P2-201ENST00000415059 510 ntBASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AC004987.2-201ENST00000395959 1148 ntBASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SDK1Q7Z5N4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SDK1Q7Z5N4 NOC2LP2-201ENST00000407594 1944 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms