Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AL353705.2-201ENST00000428243 662 ntBASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 KLF2P3-201ENST00000451977 1087 ntBASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AC024267.1-201ENST00000582320 895 ntBASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 AP3S2-216ENST00000617003 1561 ntBASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC092384.3-202ENST00000564646 2873 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC107890.1-201ENST00000422478 521 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC142381.1-201ENST00000426099 345 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 GPS2P2-201ENST00000430745 888 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 SPDYE14P-201ENST00000442619 822 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 RARRES2P9-201ENST00000565168 469 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC011467.4-201ENST00000594891 528 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC018529.1-201ENST00000613063 361 ntBASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP1BQ7LBR1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CHMP1BQ7LBR1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms