Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AC254562.1-201ENST00000417586 456 ntBASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AC026150.2-201ENST00000564693 1156 ntBASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AC007967.4-201ENST00000614700 386 ntBASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST2H3AQ71DI3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HIST2H3AQ71DI3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PRAL-201ENST00000624952 3286 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AC023141.5-201ENST00000458585 616 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AL512356.2-201ENST00000546955 174 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AC097359.3-201ENST00000603982 1210 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AP001059.3-201ENST00000619053 235 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AC105250.1-201ENST00000509378 2057 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 AC126177.1-201ENST00000547829 2218 ntBASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST2H3AQ71DI3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST2H3AQ71DI3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms