Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 KLF4P1-201ENST00000412782 1185 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 AC211429.1-201ENST00000415277 523 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 KRT18P57-201ENST00000443599 1254 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 AD001527.2-201ENST00000622994 785 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 LINC01230-201ENST00000625222 3017 ntBASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KCNIP4Q6PIL6 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CICP20-201ENST00000443330 2801 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AL353593.2-201ENST00000602529 1483 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AL592424.1-201ENST00000563624 1536 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC126365.1-201ENST00000578585 1514 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 TSPY5P-201ENST00000426936 936 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 AC140479.7-201ENST00000636301 2332 ntBASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms