Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTR9Q6PD62 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTR9Q6PD62 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTR9Q6PD62 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.77■□□□□ 0.59
CTR9Q6PD62 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 COX5BP8-201ENST00000416911 349 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 ELK1P1-201ENST00000485699 580 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 RRP7BP-205ENST00000566851 833 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CTBP2P3-201ENST00000585629 1255 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 AC093726.1-201ENST00000608064 963 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 AL035252.4-201ENST00000624174 288 ntBASIC18.76■□□□□ 0.59
CTR9Q6PD62 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTR9Q6PD62 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.76■□□□□ 0.59
CTR9Q6PD62 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 AC005034.1-201ENST00000426657 489 ntBASIC18.75■□□□□ 0.59
CTR9Q6PD62 GAPDHP21-201ENST00000450301 1010 ntBASIC18.75■□□□□ 0.59
CTR9Q6PD62 RN7SL399P-201ENST00000471648 279 ntBASIC18.75■□□□□ 0.59
CTR9Q6PD62 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 AL358472.5-202ENST00000641448 1267 ntBASIC18.75■□□□□ 0.59
CTR9Q6PD62 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
CTR9Q6PD62 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTR9Q6PD62 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 AL513523.2-202ENST00000427283 2040 ntBASIC18.74■□□□□ 0.59
CTR9Q6PD62 AC026691.1-201ENST00000602502 2017 ntBASIC18.74■□□□□ 0.59
CTR9Q6PD62 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms