Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AC128714.1-201ENST00000637035 887 ntBASIC19.59■□□□□ 0.73
RC3H1Q5TC82 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RC3H1Q5TC82 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 AC138932.1-201ENST00000534164 6830 ntBASIC19.58■□□□□ 0.73
RC3H1Q5TC82 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.58■□□□□ 0.73
RC3H1Q5TC82 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AL354877.1-201ENST00000424412 413 ntBASIC19.58■□□□□ 0.72
RC3H1Q5TC82 EIF3FP3-201ENST00000434851 1086 ntBASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AP003171.2-201ENST00000528208 925 ntBASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 RN7SL774P-201ENST00000577467 290 ntBASIC19.58■□□□□ 0.72
RC3H1Q5TC82 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RC3H1Q5TC82 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AL133466.1-201ENST00000447582 150 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 RPS2P36-201ENST00000456516 831 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 SPCS2P2-201ENST00000603270 608 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 AL603764.1-201ENST00000636452 321 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RC3H1Q5TC82 FLJ38576-201ENST00000623820 2459 ntBASIC19.57■□□□□ 0.72
RC3H1Q5TC82 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.56■□□□□ 0.72
RC3H1Q5TC82 MAGEA5-201ENST00000446757 942 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms