Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
RFX4Q33E94 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.8□□□□□ -0.04
RFX4Q33E94 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
RFX4Q33E94 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RFX4Q33E94 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.8□□□□□ -0.04
RFX4Q33E94 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFX4Q33E94 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.79□□□□□ -0.04
RFX4Q33E94 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 AC093724.1-201ENST00000448659 1027 ntBASIC14.79□□□□□ -0.04
RFX4Q33E94 EMBP1-201ENST00000458200 901 ntBASIC14.79□□□□□ -0.04
RFX4Q33E94 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.79□□□□□ -0.04
RFX4Q33E94 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RFX4Q33E94 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RFX4Q33E94 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFX4Q33E94 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFX4Q33E94 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
RFX4Q33E94 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RFX4Q33E94 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.78□□□□□ -0.04
RFX4Q33E94 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.78□□□□□ -0.04
RFX4Q33E94 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFX4Q33E94 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.78□□□□□ -0.04
RFX4Q33E94 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RFX4Q33E94 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFX4Q33E94 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
RFX4Q33E94 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
RFX4Q33E94 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.77□□□□□ -0.04
RFX4Q33E94 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
RFX4Q33E94 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.77□□□□□ -0.04
RFX4Q33E94 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFX4Q33E94 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.77□□□□□ -0.04
RFX4Q33E94 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RFX4Q33E94 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms