Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB40BQ12829 MIR4751-201ENST00000578027 74 ntBASIC14.22□□□□□ -0.13
RAB40BQ12829 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB40BQ12829 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 AC007686.3-201ENST00000619017 3487 ntBASIC14.22□□□□□ -0.13
RAB40BQ12829 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 RPS2P28-201ENST00000314255 741 ntBASIC14.21□□□□□ -0.13
RAB40BQ12829 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
RAB40BQ12829 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40BQ12829 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
RAB40BQ12829 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40BQ12829 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40BQ12829 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40BQ12829 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40BQ12829 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB40BQ12829 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB40BQ12829 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.21□□□□□ -0.14
RAB40BQ12829 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB40BQ12829 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RAB40BQ12829 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.21□□□□□ -0.14
RAB40BQ12829 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40BQ12829 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RAB40BQ12829 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB40BQ12829 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40BQ12829 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40BQ12829 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40BQ12829 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB40BQ12829 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAB40BQ12829 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB40BQ12829 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40BQ12829 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB40BQ12829 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB40BQ12829 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAB40BQ12829 AC004987.2-201ENST00000395959 1148 ntBASIC14.2□□□□□ -0.14
RAB40BQ12829 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40BQ12829 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40BQ12829 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40BQ12829 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40BQ12829 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40BQ12829 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40BQ12829 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40BQ12829 AC024267.1-201ENST00000582320 895 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms