Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
SSBP1Q04837 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP1Q04837 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
SSBP1Q04837 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SSBP1Q04837 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SSBP1Q04837 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SSBP1Q04837 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP1Q04837 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP1Q04837 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP1Q04837 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.43□□□□□ -0.26
SSBP1Q04837 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP1Q04837 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC138969.2-201ENST00000532739 9932 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 AL691432.1-201ENST00000596308 1422 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 MRPL20P1-201ENST00000400819 433 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC136632.2-201ENST00000512891 861 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC011467.4-201ENST00000594891 528 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC107918.4-202ENST00000641623 219 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 AC073439.1-201ENST00000624121 1774 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 AC006504.5-208ENST00000588784 2401 ntBASIC13.42□□□□□ -0.26
SSBP1Q04837 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP1Q04837 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP1Q04837 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SSBP1Q04837 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP1Q04837 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 AC136759.1-202ENST00000530858 2194 ntBASIC13.41□□□□□ -0.26
SSBP1Q04837 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP1Q04837 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SSBP1Q04837 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP1Q04837 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SSBP1Q04837 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP1Q04837 FGFR3P6-201ENST00000457012 610 ntBASIC13.41□□□□□ -0.26
SSBP1Q04837 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SSBP1Q04837 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP1Q04837 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.41□□□□□ -0.26
SSBP1Q04837 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.41□□□□□ -0.26
SSBP1Q04837 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SSBP1Q04837 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms