Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB1AP62820 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RAB1AP62820 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB1AP62820 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB1AP62820 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB1AP62820 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB1AP62820 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RAB1AP62820 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB1AP62820 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB1AP62820 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 KRT8P12-202ENST00000472924 1397 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 FO538757.1-201ENST00000623083 1397 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 REXO1L1P-202ENST00000608646 1974 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.97□□□□□ -0.17
RAB1AP62820 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 HLA-V-204ENST00000476601 1289 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 AC097493.3-201ENST00000509725 367 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 IGHV3-42-201ENST00000520410 361 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB1AP62820 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB1AP62820 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 AL138828.2-201ENST00000615812 383 ntBASIC13.97□□□□□ -0.17
RAB1AP62820 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB1AP62820 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB1AP62820 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
RAB1AP62820 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB1AP62820 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB1AP62820 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB1AP62820 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB1AP62820 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB1AP62820 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 TCAF2P1-201ENST00000291129 2421 ntBASIC13.96□□□□□ -0.17
RAB1AP62820 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAB1AP62820 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 PRAL-201ENST00000624952 3286 ntBASIC13.96□□□□□ -0.17
RAB1AP62820 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB1AP62820 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB1AP62820 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB1AP62820 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB1AP62820 RPL37AP1-201ENST00000412502 279 ntBASIC13.96□□□□□ -0.17
RAB1AP62820 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms