Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SRP54P61011 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRP54P61011 AL365209.1-201ENST00000624418 6473 ntBASIC15.64■□□□□ 0.09
SRP54P61011 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 REXO1L1P-202ENST00000608646 1974 ntBASIC15.64■□□□□ 0.09
SRP54P61011 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SRP54P61011 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 INE1-201ENST00000456273 945 ntBASIC15.64■□□□□ 0.09
SRP54P61011 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SRP54P61011 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.64■□□□□ 0.09
SRP54P61011 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.64■□□□□ 0.09
SRP54P61011 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.64■□□□□ 0.09
SRP54P61011 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SRP54P61011 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRP54P61011 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.64■□□□□ 0.09
SRP54P61011 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SRP54P61011 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 PCDHA14-201ENST00000506751 2298 ntBASIC15.63■□□□□ 0.09
SRP54P61011 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SRP54P61011 MIR648-201ENST00000385046 94 ntBASIC15.63■□□□□ 0.09
SRP54P61011 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.63■□□□□ 0.09
SRP54P61011 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 RPL13P2-201ENST00000440687 659 ntBASIC15.63■□□□□ 0.09
SRP54P61011 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.63■□□□□ 0.09
SRP54P61011 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 ELK1P1-201ENST00000485699 580 ntBASIC15.63■□□□□ 0.09
SRP54P61011 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 AL450472.2-201ENST00000603663 1156 ntBASIC15.63■□□□□ 0.09
SRP54P61011 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.63■□□□□ 0.09
SRP54P61011 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.63■□□□□ 0.09
SRP54P61011 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRP54P61011 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
SRP54P61011 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SRP54P61011 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
SRP54P61011 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 C8orf49-201ENST00000525043 1968 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms