Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.45□□□□□ -0.42
FAM3BP58499 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FAM3BP58499 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.44□□□□□ -0.42
FAM3BP58499 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.44□□□□□ -0.42
FAM3BP58499 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
FAM3BP58499 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
FAM3BP58499 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
FAM3BP58499 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.44□□□□□ -0.42
FAM3BP58499 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.44□□□□□ -0.42
FAM3BP58499 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
FAM3BP58499 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.44□□□□□ -0.42
FAM3BP58499 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
FAM3BP58499 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 PCGF3-213ENST00000620529 1899 ntBASIC12.44□□□□□ -0.42
FAM3BP58499 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.44□□□□□ -0.42
FAM3BP58499 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
FAM3BP58499 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 AC008677.1-201ENST00000519230 1561 ntBASIC12.43□□□□□ -0.42
FAM3BP58499 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.43□□□□□ -0.42
FAM3BP58499 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
FAM3BP58499 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 SAPCD2P3-201ENST00000455031 850 ntBASIC12.43□□□□□ -0.42
FAM3BP58499 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 AL160237.2-201ENST00000556165 472 ntBASIC12.43□□□□□ -0.42
FAM3BP58499 AC138894.3-201ENST00000603787 634 ntBASIC12.43□□□□□ -0.42
FAM3BP58499 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.43□□□□□ -0.42
FAM3BP58499 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM3BP58499 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM3BP58499 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms