Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 BTBD7P1-201ENST00000447253 1453 ntBASIC14.75□□□□□ -0.05
PER3P56645 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PER3P56645 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PER3P56645 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PER3P56645 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PER3P56645 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.74□□□□□ -0.05
PER3P56645 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.74□□□□□ -0.05
PER3P56645 RPS2P32-201ENST00000439199 892 ntBASIC14.74□□□□□ -0.05
PER3P56645 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.74□□□□□ -0.05
PER3P56645 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.74□□□□□ -0.05
PER3P56645 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.74□□□□□ -0.05
PER3P56645 AL138918.1-201ENST00000568306 659 ntBASIC14.74□□□□□ -0.05
PER3P56645 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PER3P56645 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 LINC00895-201ENST00000629028 1637 ntBASIC14.74□□□□□ -0.05
PER3P56645 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.74□□□□□ -0.05
PER3P56645 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.73□□□□□ -0.05
PER3P56645 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 RNF216P1-203ENST00000404404 2427 ntBASIC14.73□□□□□ -0.05
PER3P56645 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PER3P56645 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PER3P56645 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.73□□□□□ -0.05
PER3P56645 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.73□□□□□ -0.05
PER3P56645 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.73□□□□□ -0.05
PER3P56645 INE1-201ENST00000456273 945 ntBASIC14.73□□□□□ -0.05
PER3P56645 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 AC093004.1-201ENST00000508850 424 ntBASIC14.73□□□□□ -0.05
PER3P56645 PRYP6-201ENST00000514804 343 ntBASIC14.73□□□□□ -0.05
PER3P56645 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.73□□□□□ -0.05
PER3P56645 API5-211ENST00000534695 560 ntTSL 5 BASIC14.73□□□□□ -0.05
PER3P56645 AC135586.1-201ENST00000539323 574 ntBASIC14.73□□□□□ -0.05
PER3P56645 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 RAB43P1-201ENST00000561790 589 ntBASIC14.73□□□□□ -0.05
PER3P56645 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.73□□□□□ -0.05
PER3P56645 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.73□□□□□ -0.05
PER3P56645 AC013467.2-201ENST00000605472 835 ntBASIC14.73□□□□□ -0.05
PER3P56645 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.73□□□□□ -0.05
PER3P56645 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.73□□□□□ -0.05
PER3P56645 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.73□□□□□ -0.05
PER3P56645 TEX28P1-201ENST00000613479 1221 ntBASIC14.73□□□□□ -0.05
PER3P56645 TEX28P2-201ENST00000617764 1221 ntBASIC14.73□□□□□ -0.05
PER3P56645 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.73□□□□□ -0.05
PER3P56645 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.73□□□□□ -0.05
PER3P56645 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.73□□□□□ -0.05
PER3P56645 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PER3P56645 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms