Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDH12P55289 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 FAM45BP-202ENST00000592932 1624 ntBASIC14.82□□□□□ -0.04
CDH12P55289 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 C18orf15-201ENST00000623680 2534 ntBASIC14.82□□□□□ -0.04
CDH12P55289 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 AC002056.1-201ENST00000395613 760 ntBASIC14.82□□□□□ -0.04
CDH12P55289 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 SLC25A1P1-201ENST00000528351 927 ntBASIC14.82□□□□□ -0.04
CDH12P55289 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
CDH12P55289 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.82□□□□□ -0.04
CDH12P55289 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.82□□□□□ -0.04
CDH12P55289 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 BX640515.1-201ENST00000617215 977 ntBASIC14.82□□□□□ -0.04
CDH12P55289 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDH12P55289 AC092865.6-201ENST00000642101 219 ntBASIC14.82□□□□□ -0.04
CDH12P55289 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 PMS2P7-201ENST00000506558 1336 ntBASIC14.82□□□□□ -0.04
CDH12P55289 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CDH12P55289 AC097376.2-205ENST00000610159 5334 ntBASIC14.82□□□□□ -0.04
CDH12P55289 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.82□□□□□ -0.04
CDH12P55289 AC112693.3-201ENST00000624819 1983 ntBASIC14.82□□□□□ -0.04
CDH12P55289 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH12P55289 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH12P55289 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AC106881.1-201ENST00000605849 3329 ntBASIC14.81□□□□□ -0.04
CDH12P55289 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDH12P55289 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH12P55289 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH12P55289 RNA5SP416-201ENST00000516838 111 ntBASIC14.81□□□□□ -0.04
CDH12P55289 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.81□□□□□ -0.04
CDH12P55289 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AL009178.2-201ENST00000597278 2719 ntBASIC14.81□□□□□ -0.04
CDH12P55289 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.81□□□□□ -0.04
CDH12P55289 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AC009090.5-201ENST00000624886 2285 ntBASIC14.81□□□□□ -0.04
CDH12P55289 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH12P55289 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDH12P55289 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH12P55289 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms