Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.95■□□□□ 0.3
RAD23BP54727 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.95■□□□□ 0.3
RAD23BP54727 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RAD23BP54727 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RAD23BP54727 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAD23BP54727 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.94■□□□□ 0.3
RAD23BP54727 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 AC063926.3-201ENST00000624734 5658 ntBASIC16.94■□□□□ 0.3
RAD23BP54727 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.94■□□□□ 0.3
RAD23BP54727 AC136604.1-201ENST00000418535 575 ntBASIC16.94■□□□□ 0.3
RAD23BP54727 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.94■□□□□ 0.3
RAD23BP54727 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.94■□□□□ 0.3
RAD23BP54727 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.94■□□□□ 0.3
RAD23BP54727 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAD23BP54727 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.94■□□□□ 0.3
RAD23BP54727 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 AC144831.1-201ENST00000573312 2656 ntBASIC16.94■□□□□ 0.3
RAD23BP54727 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RAD23BP54727 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAD23BP54727 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAD23BP54727 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.94■□□□□ 0.3
RAD23BP54727 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAD23BP54727 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.93■□□□□ 0.3
RAD23BP54727 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.93■□□□□ 0.3
RAD23BP54727 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.93■□□□□ 0.3
RAD23BP54727 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 RN7SL618P-201ENST00000477850 296 ntBASIC16.93■□□□□ 0.3
RAD23BP54727 AC004890.2-204ENST00000481968 304 ntBASIC16.93■□□□□ 0.3
RAD23BP54727 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.93■□□□□ 0.3
RAD23BP54727 AC025048.3-201ENST00000590609 569 ntBASIC16.93■□□□□ 0.3
RAD23BP54727 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.93■□□□□ 0.3
RAD23BP54727 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 AC005702.4-201ENST00000618393 416 ntBASIC16.93■□□□□ 0.3
RAD23BP54727 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RAD23BP54727 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAD23BP54727 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms