Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PMS1P54277 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 AC023141.5-201ENST00000458585 616 ntBASIC17.41■□□□□ 0.38
PMS1P54277 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
PMS1P54277 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.41■□□□□ 0.38
PMS1P54277 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 MIR3687-2-201ENST00000577708 61 ntBASIC17.41■□□□□ 0.38
PMS1P54277 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.41■□□□□ 0.38
PMS1P54277 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 AC027612.4-201ENST00000605371 583 ntBASIC17.41■□□□□ 0.38
PMS1P54277 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 MIR3687-1-201ENST00000614492 61 ntBASIC17.41■□□□□ 0.38
PMS1P54277 AC007967.4-201ENST00000614700 386 ntBASIC17.41■□□□□ 0.38
PMS1P54277 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.41■□□□□ 0.38
PMS1P54277 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PMS1P54277 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.41■□□□□ 0.38
PMS1P54277 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.4■□□□□ 0.38
PMS1P54277 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.4■□□□□ 0.38
PMS1P54277 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 AC211486.1-202ENST00000416371 468 ntBASIC17.4■□□□□ 0.38
PMS1P54277 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.4■□□□□ 0.38
PMS1P54277 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.4■□□□□ 0.38
PMS1P54277 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.4■□□□□ 0.38
PMS1P54277 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 AC211476.1-201ENST00000503899 468 ntBASIC17.4■□□□□ 0.38
PMS1P54277 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PMS1P54277 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PMS1P54277 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
PMS1P54277 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.4■□□□□ 0.38
PMS1P54277 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PMS1P54277 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PMS1P54277 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PMS1P54277 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.39■□□□□ 0.38
PMS1P54277 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PMS1P54277 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PMS1P54277 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 CICP24-201ENST00000605464 2705 ntBASIC17.39■□□□□ 0.37
PMS1P54277 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms